, which is not necessary in our method. The elastic shape metric assumes two shapes are isotopic. However, the proposed intrinsic method is applicable for general Riemannian manifolds. Our approach solely depends on Riemannian metrics and is invariant under rigid motions and scalings such that it intrinsically measures shape distance, and thus more effective and efficient for shape classification and brain morphology analysis.
3 Theory
This section briefly introduces the theoretic foundation, for thorough treatments, we refer readers to [9] for conformal geometry, and [6, 15] for optimal mass transport theory.
3.1 Conformal Mapping
Suppose S is a topological surface, a Riemannian metric
on S is a family of inner products on the tangent planes. Locally, a metric tensor is represented as a positive definite matrix
. Let
be a diffeomorphic map between two Riemannian surfaces, the pull back metric on the source induced by
is
, where J is the Jacobian matrix of
. The mapping is conformal or angle-preserving, if the pull back metric and the original metric differ by a scalar function,
, where
is called the conformal factor.








Hamilton’s surface Ricci flow conformably deforms the Riemannian metric proprotional to the curvature, such that the curvature evolves according to a non-linear heat diffusion process, and becomes constant everywhere.
Definition 1
(Surface Ricci Flow). The normalized surface Ricci flow is defined as
where
is the Euler characteristic number of the surface, A(0) is the total area at the initial time.


Theorem 1
(Uniformization). Suppose
is a closed compact Riemannian surface with genus g, then there is a conformal factor function
, such that the conformal metric
induces constant Gaussian curvature. Depending on the
is positive, zero or negative, the const is
, 0 or
.






In the current work, we apply surface Ricci flow to deform the human cortical surface to the unit sphere.
3.2 Optimal Mass Transport
The Optimal mass transportation problem was first raised by Monge [5] in the 18th century. Suppose
is a Riemannian manifold with a metric
. Let
and
be two probability measures on S with the same total mass
,
be a diffeomorphism, the pull back measure induced by
is
. The mapping is called measure preserving, if the pull back measure equals to the initial measure,
. The transportation cost of
is defined as

The optimal mass transportation problem is to find the measure preserving mapping, which minimizes the transportation cost,
In the 1940s, Kantorovich introduced the relaxation of Monge’s problem and solved it using linear programming method [15].











(1)

Theorem 2
(Kantorovich). Suppose
is a Riemannian manifold, probability measures
and
have the same total mass,
is absolutely continuous,
has finite second moment, the cost function is the squared geodesic distance, then the optimal mass transportation map exists and is unique.





If
is a convex domain in the Euclidean space, then Brenier proved the following theorem.

Theorem 3
(Brenier). There is a convex function
, the optimal map is given by the gradient map
.


Solving the optimal transportation problem is equivalent to solve the following Monge-Amperé equation,


3.3 Wasserstein Metric Space
Suppose
is a Riemannian manifold with a Riemannian metric
.


Definition 2
(Wasserstein Space). For
, let
denote the space of all probability measures
on M with finite
moment, for some
,
where d is the geodesic distance induced by
.







Given two probability
and
in
, the Wasserstein distance between them is defined as the transportation cost induced by the optimal transportation map
,
The following theorem plays a fundamental role for the current work





Theorem 4
The Wasserstein distance
is a Riemannian metric of the Wasserstein space
.


Detailed proof can be found in [28].
3.4 Discrete Optimal Mass Transport
Let
be a discrete point set on S,
be the weight vector.


Definition 3
(Geodesic Power Voronoi Diagram). Given the point set P and the weight
, the geodesic power voronoi diagram induced by
is a cell decomposition of the manifold
, such that the cell associated with
is given by






Theorem 5
(Discrete Optimal Mass Transportation Map). Given a Riemannian manifold
, two probability measures
and
are of the same total mass.
is a Dirac measure, with discrete point set support
,
. There exists a weight
, unique up to a constant, the geodesic power Voronoi diagram induced by
gives the optimal mass transportation map,








